PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010112707.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HB-other
Protein Properties Length: 965aa    MW: 107799 Da    PI: 5.7171
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010112707.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.84.8e-05735795154
                     TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 
                     +rkRt ++++q+e +e++   ++ +  +a+ ++  A+kl     ++t +q k+W  Nr+a+
  XP_010112707.1 735 KRKRTIMNDKQVELMERALVDEPDMqrNASLIQAWADKLsfhgsEVTSSQLKNWLNNRKAR 795
                     79****************99877661145679****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.1E-5718796IPR009057Homeodomain-like
PROSITE profilePS5007110.382732799IPR001356Homeobox domain
SMARTSM003890.0014734803IPR001356Homeobox domain
CDDcd000860.00122735799No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0060195Biological Processnegative regulation of antisense RNA transcription
GO:0005730Cellular Componentnucleolus
GO:0003697Molecular Functionsingle-stranded DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 965 aa     Download sequence    Send to blast
MWIIDTVQVV DLISAVKELH RLNSQELNRL LRDSENFTIQ HVTEKGSVLK IDMEKFVGFL  60
PLHLIAVLMS SGRDEALFRY LLCGLRLLHS FCELAPRNAK LEQILLDDVK VSEQLLDMVL  120
YLLIVCGRVE QKNHDFGALP LVHSALVACS LHLLTGFIAS QWPDLVHVLL AHPKVEIFMD  180
AAFGAVCAAI RFLEIKLSAQ HSDFSFCKYS SLSPEQEVNY LCQQCEASLQ FLQSLCQQKT  240
FRERLLRNKE LCGKGGILFA THAILRLNVT PHFLEFPRVV AAVSRLKAKV LSILVSLCEA  300
ESISYLDEVA SSPGTLDLAK SVASEVLDLL TTALGRDPRL LTTGSERNYP VGFLQLNAMR  360
LADIFSDDSN FRSYITIYFT RVLTAIFSLP HGDFLSSWCS SELPVKEDDG SIEYDSFASA  420
GWVLDVLSSI NPQHAPSLEF TVVSNSLQQA SYAHQRTSLF VKVIANLHCF VPNICEEQER  480
NLFLNKFMEC LQMDPSNALP GFSFTSDAPK AASNCGDYFL SYNQLTCAGS LLSHAESLIP  540
NFLNEEDVQL LRVFFNQLQS LLNSREHEEN RVQERKFEEP MSWEKFSKLN LIEHHQEAQS  600
AGGCSSPLLM KEPPNLNNRS SSLKEEMSEN SAIQDADQKY QNIEHTAQGG DAVREDKGKS  660
SRSAFGGTVE IDKDAQNVET SGSDTSSTRG KNVDQMDNSE FPKSSAPTKE SGYGRNAAEE  720
KKVETVQHDE KQRRKRKRTI MNDKQVELME RALVDEPDMQ RNASLIQAWA DKLSFHGSEV  780
TSSQLKNWLN NRKARLARTG KDVRPTLEAE NSFLEKQGGP ILRSNYSPES PGEDATVQPN  840
VGRDPQAMTW RTNAAETSEV APAEAAFGPS EFVQCEPGQQ VVIVDAAGEE IAKGKVFQVH  900
GKWYGKNLDE LRTCVVDVKD LKVKRGTRLP HPSVATGGSF EEAETKIGVM RVLWDSSKIF  960
VLRSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1732737RRKRKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010112707.10.0hypothetical protein L484_020433
TrEMBLW9SLS70.0W9SLS7_9R
STRINGVIT_07s0104g01050.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF386946